Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 AC034232.1-201ENST00000506026 1064 ntBASIC23.38■■□□□ 1.33
RTL9Q8NET4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 AL109659.2-201ENST00000606809 1674 ntBASIC23.37■■□□□ 1.33
RTL9Q8NET4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.37■■□□□ 1.33
RTL9Q8NET4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.37■■□□□ 1.33
RTL9Q8NET4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTL9Q8NET4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RTL9Q8NET4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.36■■□□□ 1.33
RTL9Q8NET4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 AC012313.10-201ENST00000623509 926 ntBASIC23.36■■□□□ 1.33
RTL9Q8NET4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTL9Q8NET4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.35■■□□□ 1.33
RTL9Q8NET4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 AC026396.1-201ENST00000419388 421 ntBASIC23.35■■□□□ 1.33
RTL9Q8NET4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.35■■□□□ 1.33
RTL9Q8NET4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
RTL9Q8NET4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.35■■□□□ 1.33
RTL9Q8NET4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.35■■□□□ 1.33
RTL9Q8NET4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.35■■□□□ 1.33
RTL9Q8NET4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL9Q8NET4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTL9Q8NET4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTL9Q8NET4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 AL512353.2-201ENST00000448759 1962 ntBASIC23.34■■□□□ 1.33
RTL9Q8NET4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTL9Q8NET4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RTL9Q8NET4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.34■■□□□ 1.33
RTL9Q8NET4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.33■■□□□ 1.33
RTL9Q8NET4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.33■■□□□ 1.33
RTL9Q8NET4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTL9Q8NET4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTL9Q8NET4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RTL9Q8NET4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RTL9Q8NET4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTL9Q8NET4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTL9Q8NET4 AC024243.1-201ENST00000609234 778 ntBASIC23.33■■□□□ 1.33
RTL9Q8NET4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RTL9Q8NET4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.33■■□□□ 1.32
RTL9Q8NET4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RTL9Q8NET4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
RTL9Q8NET4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
RTL9Q8NET4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RTL9Q8NET4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
RTL9Q8NET4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RTL9Q8NET4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms