Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 AL049637.2-201ENST00000641778 930 ntBASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 IRX1P1-201ENST00000438849 1838 ntBASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 MESTP1-201ENST00000404287 994 ntBASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 AC131212.4-201ENST00000623606 975 ntBASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 RCC2P6-201ENST00000526625 1557 ntBASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.87■□□□□ 0.45
SIMC1Q8NDZ2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 AC012618.2-201ENST00000428058 849 ntBASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 TSPY7P-201ENST00000431358 1114 ntBASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 AC091390.4-202ENST00000476426 537 ntBASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIMC1Q8NDZ2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 TSPY23P-201ENST00000440136 739 ntBASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 AL135905.2-201ENST00000584934 1404 ntBASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms