Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 GPAT2P1-201ENST00000444924 1672 ntBASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 SLC25A3P1-201ENST00000443844 931 ntBASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01555Q8NAE3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LINC01555Q8NAE3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 AL023284.2-201ENST00000405850 579 ntBASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 AC005363.2-201ENST00000618631 242 ntBASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01555Q8NAE3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 KRT8P32-201ENST00000512863 1461 ntBASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 HMGA1P5-201ENST00000412453 271 ntBASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 AC113347.1-201ENST00000413321 391 ntBASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 AC010203.1-204ENST00000548782 407 ntBASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01555Q8NAE3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms