Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 TSPY15P-201ENST00000457163 923 ntBASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 LINC01023-201ENST00000606054 436 ntBASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 AC133561.5-201ENST00000635547 218 ntBASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 NFIC-211ENST00000641145 8399 ntBASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 AC073130.3-201ENST00000624389 2278 ntBASIC11.15□□□□□ -0.62
LINC00304Q8N9R0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00304Q8N9R0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00304Q8N9R0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.63
LINC00304Q8N9R0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00304Q8N9R0 KRT8P41-201ENST00000533985 1514 ntBASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 AC128688.1-201ENST00000487626 519 ntBASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 AC096733.2-201ENST00000609937 1394 ntBASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00304Q8N9R0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 SDHAP1-207ENST00000440850 2000 ntBASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 CROCCP1-201ENST00000426910 5675 ntBASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 CCR12P-201ENST00000446203 998 ntBASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00304Q8N9R0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms