Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TSPY21P-201ENST00000433481 731 ntBASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 PRELID1P1-202ENST00000567272 903 ntBASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AC092119.3-201ENST00000612618 583 ntBASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AC012313.10-201ENST00000623509 926 ntBASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNPOQ8N3V7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SYNPOQ8N3V7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNPOQ8N3V7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SYNPOQ8N3V7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 TSSC2-201ENST00000450217 709 ntBASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 BX276092.5-203ENST00000456199 560 ntBASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 AC011498.5-201ENST00000592027 486 ntBASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SYNPOQ8N3V7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 AC112907.3-201ENST00000577781 2400 ntBASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SYNPOQ8N3V7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 AC111152.3-201ENST00000569699 673 ntBASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms