Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 HMGA1P5-201ENST00000412453 271 ntBASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AC113347.1-201ENST00000413321 391 ntBASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AC005363.2-201ENST00000618631 242 ntBASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
C9orf40Q8IXQ3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 GPAT2P1-201ENST00000444924 1672 ntBASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 AL512353.2-201ENST00000448759 1962 ntBASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf40Q8IXQ3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 TERF1P1-201ENST00000311003 1181 ntBASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 AC010203.1-204ENST00000548782 407 ntBASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf40Q8IXQ3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 AC005521.1-201ENST00000393351 872 ntBASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 AL023284.2-201ENST00000405850 579 ntBASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms