Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 LTB4R2-202ENST00000528054 3092 ntBASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 SLC29A4P1-201ENST00000398760 971 ntBASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 SDHAP1-207ENST00000440850 2000 ntBASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 MYC-209ENST00000641252 345 ntBASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCHD4Q6ZW05 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 NOC2LP2-201ENST00000407594 1944 ntBASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 RPS2P52-201ENST00000469610 820 ntBASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 AC104417.2-201ENST00000562989 1793 ntBASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCHD4Q6ZW05 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms