Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 ID1-201ENST00000376105 1233 ntBASIC19.35■□□□□ 0.69
CASC4Q6P4E1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CASC4Q6P4E1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.34■□□□□ 0.69
CASC4Q6P4E1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASC4Q6P4E1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASC4Q6P4E1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 AC069544.1-201ENST00000609399 999 ntBASIC19.33■□□□□ 0.68
CASC4Q6P4E1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 AC104581.1-202ENST00000635932 2618 ntBASIC19.33■□□□□ 0.68
CASC4Q6P4E1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CASC4Q6P4E1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms