Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 AP001330.3-201ENST00000520123 633 ntBASIC17.9■□□□□ 0.46
LPCAT4Q643R3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 AC083906.6-201ENST00000641366 219 ntBASIC17.9■□□□□ 0.46
LPCAT4Q643R3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT4Q643R3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LPCAT4Q643R3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
LPCAT4Q643R3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LPCAT4Q643R3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
LPCAT4Q643R3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
LPCAT4Q643R3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 AC008406.3-201ENST00000620001 1374 ntBASIC17.89■□□□□ 0.45
LPCAT4Q643R3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 AC104417.2-201ENST00000562989 1793 ntBASIC17.89■□□□□ 0.45
LPCAT4Q643R3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.89■□□□□ 0.45
LPCAT4Q643R3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 EDA-201ENST00000338901 1233 ntBASIC17.88■□□□□ 0.45
LPCAT4Q643R3 YBX1P1-201ENST00000445822 960 ntBASIC17.88■□□□□ 0.45
LPCAT4Q643R3 SLC7A5P1-201ENST00000568957 537 ntBASIC17.88■□□□□ 0.45
LPCAT4Q643R3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT4Q643R3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 MIR6084-201ENST00000622012 110 ntBASIC17.87■□□□□ 0.45
LPCAT4Q643R3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.87■□□□□ 0.45
LPCAT4Q643R3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms