Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 FOSL1P1-201ENST00000511041 816 ntBASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 RNF126P1-202ENST00000569893 925 ntBASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 AL160237.2-201ENST00000556165 472 ntBASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LYSMD4Q5XG99 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.58■□□□□ 0.57
LYSMD4Q5XG99 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 AL022342.1-201ENST00000400363 863 ntBASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD4Q5XG99 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 GABARAPL3-202ENST00000624044 1851 ntBASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 KRT18P23-201ENST00000435622 1283 ntBASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 AC104819.1-201ENST00000504587 486 ntBASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 KRT18P31-201ENST00000506277 1292 ntBASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 AC104692.2-201ENST00000603054 253 ntBASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD4Q5XG99 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 Z83836.1-201ENST00000624605 1642 ntBASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms