Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A4Q4VNC1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 KSR1P1-201ENST00000446298 240 ntBASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 AF186192.3-201ENST00000583427 947 ntBASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A4Q4VNC1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
ATP13A4Q4VNC1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP13A4Q4VNC1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.77■□□□□ 0.75
ATP13A4Q4VNC1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP13A4Q4VNC1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 RCC2P6-201ENST00000526625 1557 ntBASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 AC098590.1-201ENST00000468126 897 ntBASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 FAM197Y4-202ENST00000622692 608 ntBASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A4Q4VNC1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 AC011506.1-201ENST00000474329 610 ntBASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 AC005082.1-201ENST00000413042 2259 ntBASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A4Q4VNC1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms