Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRFAM7AQ494W8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 AL353807.1-201ENST00000427475 662 ntBASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 AC145285.6-201ENST00000604632 637 ntBASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 MIR6786-201ENST00000616843 113 ntBASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRFAM7AQ494W8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRFAM7AQ494W8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 AL031963.3-201ENST00000606441 850 ntBASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 KRT8P20-201ENST00000423953 1409 ntBASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 PTBP1P-201ENST00000554374 1601 ntBASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRFAM7AQ494W8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRFAM7AQ494W8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRFAM7AQ494W8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRFAM7AQ494W8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms