Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 AL391807.1-203ENST00000604392 2365 ntBASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 LINC01006-201ENST00000333319 2292 ntBASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 KRT8P26-201ENST00000534154 1276 ntBASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 PRELID1P1-202ENST00000567272 903 ntBASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 AP002414.4-201ENST00000589764 1148 ntBASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 AL136038.4-201ENST00000603606 1261 ntBASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM71Q2Q1W2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRIM71Q2Q1W2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM71Q2Q1W2 AC112907.3-201ENST00000577781 2400 ntBASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 RNF126P1-202ENST00000569893 925 ntBASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM71Q2Q1W2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.9
TRIM71Q2Q1W2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM71Q2Q1W2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM71Q2Q1W2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM71Q2Q1W2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms