Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CDC42P60953 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42P60953 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42P60953 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42P60953 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CDC42P60953 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDC42P60953 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42P60953 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDC42P60953 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDC42P60953 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDC42P60953 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDC42P60953 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDC42P60953 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 AC016769.1-201ENST00000409132 1010 ntBASIC17.34■□□□□ 0.37
CDC42P60953 LSM12P1-201ENST00000411836 588 ntBASIC17.34■□□□□ 0.37
CDC42P60953 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.34■□□□□ 0.37
CDC42P60953 AC034268.1-201ENST00000441047 882 ntBASIC17.34■□□□□ 0.37
CDC42P60953 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDC42P60953 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC42P60953 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDC42P60953 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDC42P60953 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDC42P60953 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42P60953 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CDC42P60953 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC42P60953 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDC42P60953 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CDC42P60953 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CDC42P60953 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.33■□□□□ 0.37
CDC42P60953 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC42P60953 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CDC42P60953 MKRN4P-201ENST00000444706 1521 ntBASIC17.33■□□□□ 0.37
CDC42P60953 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42P60953 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC42P60953 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42P60953 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.33■□□□□ 0.36
CDC42P60953 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42P60953 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CDC42P60953 AC231657.2-201ENST00000624556 255 ntBASIC17.33■□□□□ 0.36
CDC42P60953 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CDC42P60953 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 AC073592.3-201ENST00000625118 1834 ntBASIC17.33■□□□□ 0.36
CDC42P60953 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDC42P60953 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC42P60953 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42P60953 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC42P60953 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42P60953 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42P60953 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms