Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2AP49459 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
UBE2AP49459 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2AP49459 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
UBE2AP49459 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2AP49459 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
UBE2AP49459 AL032819.2-201ENST00000624543 2162 ntBASIC12.02□□□□□ -0.48
UBE2AP49459 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 Z82202.1-201ENST00000623446 1880 ntBASIC12.02□□□□□ -0.48
UBE2AP49459 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.48
UBE2AP49459 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2AP49459 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2AP49459 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
UBE2AP49459 TUBB8P6-201ENST00000436895 1288 ntBASIC12.02□□□□□ -0.49
UBE2AP49459 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2AP49459 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2AP49459 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
UBE2AP49459 AC083880.1-201ENST00000608266 535 ntBASIC12.02□□□□□ -0.49
UBE2AP49459 AC120498.8-201ENST00000614275 531 ntBASIC12.02□□□□□ -0.49
UBE2AP49459 TNXA-203ENST00000507684 2038 ntBASIC12.02□□□□□ -0.49
UBE2AP49459 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2AP49459 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.02□□□□□ -0.49
UBE2AP49459 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
UBE2AP49459 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.02□□□□□ -0.49
UBE2AP49459 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.02□□□□□ -0.49
UBE2AP49459 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.02□□□□□ -0.49
UBE2AP49459 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
UBE2AP49459 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBE2AP49459 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
UBE2AP49459 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.01□□□□□ -0.49
UBE2AP49459 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.01□□□□□ -0.49
UBE2AP49459 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.01□□□□□ -0.49
UBE2AP49459 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2AP49459 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
UBE2AP49459 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.01□□□□□ -0.49
UBE2AP49459 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.01□□□□□ -0.49
UBE2AP49459 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
UBE2AP49459 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBE2AP49459 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms