Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.68■□□□□ 0.26
CX3CR1P49238 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CX3CR1P49238 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CX3CR1P49238 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.67■□□□□ 0.26
CX3CR1P49238 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.67■□□□□ 0.26
CX3CR1P49238 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 TSPY21P-201ENST00000433481 731 ntBASIC16.67■□□□□ 0.26
CX3CR1P49238 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.67■□□□□ 0.26
CX3CR1P49238 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.67■□□□□ 0.26
CX3CR1P49238 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.67■□□□□ 0.26
CX3CR1P49238 AL138781.2-201ENST00000617896 1843 ntBASIC16.67■□□□□ 0.26
CX3CR1P49238 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.67■□□□□ 0.26
CX3CR1P49238 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CX3CR1P49238 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.67■□□□□ 0.26
CX3CR1P49238 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CX3CR1P49238 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CX3CR1P49238 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CX3CR1P49238 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CX3CR1P49238 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.66■□□□□ 0.26
CX3CR1P49238 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.66■□□□□ 0.26
CX3CR1P49238 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 KRT16P5-201ENST00000455284 522 ntBASIC16.66■□□□□ 0.26
CX3CR1P49238 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.66■□□□□ 0.26
CX3CR1P49238 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.66■□□□□ 0.26
CX3CR1P49238 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.66■□□□□ 0.26
CX3CR1P49238 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.66■□□□□ 0.26
CX3CR1P49238 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.66■□□□□ 0.26
CX3CR1P49238 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CX3CR1P49238 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CX3CR1P49238 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.65■□□□□ 0.26
CX3CR1P49238 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.65■□□□□ 0.26
CX3CR1P49238 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.65■□□□□ 0.26
CX3CR1P49238 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.65■□□□□ 0.26
CX3CR1P49238 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.65■□□□□ 0.26
CX3CR1P49238 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CX3CR1P49238 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms