Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSNK1DP48730 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSNK1DP48730 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSNK1DP48730 LIN28AP1-201ENST00000429574 405 ntBASIC19.02■□□□□ 0.64
CSNK1DP48730 AC010203.1-204ENST00000548782 407 ntBASIC19.02■□□□□ 0.64
CSNK1DP48730 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CSNK1DP48730 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.02■□□□□ 0.64
CSNK1DP48730 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSNK1DP48730 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CSNK1DP48730 AC092865.7-201ENST00000641832 219 ntBASIC19.02■□□□□ 0.64
CSNK1DP48730 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.02■□□□□ 0.64
CSNK1DP48730 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.02■□□□□ 0.63
CSNK1DP48730 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CSNK1DP48730 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CSNK1DP48730 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 RCC2P3-201ENST00000418112 1537 ntBASIC19.01■□□□□ 0.63
CSNK1DP48730 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.01■□□□□ 0.63
CSNK1DP48730 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 RCN1P1-201ENST00000400413 996 ntBASIC19.01■□□□□ 0.63
CSNK1DP48730 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.01■□□□□ 0.63
CSNK1DP48730 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.01■□□□□ 0.63
CSNK1DP48730 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.01■□□□□ 0.63
CSNK1DP48730 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.01■□□□□ 0.63
CSNK1DP48730 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.01■□□□□ 0.63
CSNK1DP48730 CR769767.2-201ENST00000622735 460 ntBASIC19.01■□□□□ 0.63
CSNK1DP48730 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.01■□□□□ 0.63
CSNK1DP48730 AC083906.6-201ENST00000641366 219 ntBASIC19.01■□□□□ 0.63
CSNK1DP48730 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.01■□□□□ 0.63
CSNK1DP48730 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CSNK1DP48730 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.01■□□□□ 0.63
CSNK1DP48730 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1DP48730 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CSNK1DP48730 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19■□□□□ 0.63
CSNK1DP48730 KRT8P45-201ENST00000414328 1447 ntBASIC19■□□□□ 0.63
CSNK1DP48730 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSNK1DP48730 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19■□□□□ 0.63
CSNK1DP48730 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19■□□□□ 0.63
CSNK1DP48730 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSNK1DP48730 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19■□□□□ 0.63
CSNK1DP48730 MIR3180-5-201ENST00000583743 153 ntBASIC19■□□□□ 0.63
CSNK1DP48730 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19■□□□□ 0.63
CSNK1DP48730 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CSNK1DP48730 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19■□□□□ 0.63
CSNK1DP48730 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CSNK1DP48730 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSNK1DP48730 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19■□□□□ 0.63
CSNK1DP48730 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19■□□□□ 0.63
CSNK1DP48730 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1DP48730 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19■□□□□ 0.63
CSNK1DP48730 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19■□□□□ 0.63
CSNK1DP48730 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1DP48730 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 AL049812.1-201ENST00000432563 2267 ntBASIC18.99■□□□□ 0.63
CSNK1DP48730 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CSNK1DP48730 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms