Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KRT6CP48668 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT6CP48668 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT6CP48668 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 ESRRAP1-201ENST00000400596 1257 ntBASIC18.39■□□□□ 0.53
KRT6CP48668 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.39■□□□□ 0.53
KRT6CP48668 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
KRT6CP48668 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT6CP48668 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT6CP48668 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT6CP48668 AL031598.1-201ENST00000561511 1773 ntBASIC18.39■□□□□ 0.53
KRT6CP48668 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6CP48668 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6CP48668 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KRT6CP48668 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KRT6CP48668 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KRT6CP48668 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT6CP48668 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT6CP48668 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT6CP48668 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
KRT6CP48668 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.38■□□□□ 0.53
KRT6CP48668 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KRT6CP48668 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
KRT6CP48668 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT6CP48668 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT6CP48668 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.38■□□□□ 0.53
KRT6CP48668 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT6CP48668 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6CP48668 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KRT6CP48668 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KRT6CP48668 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
KRT6CP48668 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
KRT6CP48668 TSPY23P-201ENST00000440136 739 ntBASIC18.37■□□□□ 0.53
KRT6CP48668 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6CP48668 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6CP48668 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6CP48668 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT6CP48668 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT6CP48668 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6CP48668 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.37■□□□□ 0.53
KRT6CP48668 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6CP48668 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KRT6CP48668 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
KRT6CP48668 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT6CP48668 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT6CP48668 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT6CP48668 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT6CP48668 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT6CP48668 AC083906.6-201ENST00000641366 219 ntBASIC18.36■□□□□ 0.53
KRT6CP48668 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6CP48668 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms