Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TNFSF9P41273 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TNFSF9P41273 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TNFSF9P41273 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFSF9P41273 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF9P41273 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNFSF9P41273 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF9P41273 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
TNFSF9P41273 AC092865.7-201ENST00000641832 219 ntBASIC20.52■□□□□ 0.88
TNFSF9P41273 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF9P41273 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFSF9P41273 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF9P41273 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.52■□□□□ 0.87
TNFSF9P41273 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNFSF9P41273 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.52■□□□□ 0.87
TNFSF9P41273 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TNFSF9P41273 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNFSF9P41273 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TNFSF9P41273 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 TMPOP1-202ENST00000424642 1267 ntBASIC20.51■□□□□ 0.87
TNFSF9P41273 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.51■□□□□ 0.87
TNFSF9P41273 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
TNFSF9P41273 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.51■□□□□ 0.87
TNFSF9P41273 AL138966.2-201ENST00000621997 464 ntBASIC20.51■□□□□ 0.87
TNFSF9P41273 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF9P41273 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF9P41273 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.5■□□□□ 0.87
TNFSF9P41273 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 AL023284.2-201ENST00000405850 579 ntBASIC20.5■□□□□ 0.87
TNFSF9P41273 LIN28AP1-201ENST00000429574 405 ntBASIC20.5■□□□□ 0.87
TNFSF9P41273 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.5■□□□□ 0.87
TNFSF9P41273 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 AL512353.2-201ENST00000448759 1962 ntBASIC20.5■□□□□ 0.87
TNFSF9P41273 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF9P41273 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF9P41273 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF9P41273 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF9P41273 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF9P41273 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF9P41273 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF9P41273 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TNFSF9P41273 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF9P41273 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF9P41273 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF9P41273 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF9P41273 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF9P41273 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms