Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HADHAP40939 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.19■□□□□ 0.66
HADHAP40939 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 TSPY21P-201ENST00000433481 731 ntBASIC19.19■□□□□ 0.66
HADHAP40939 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.19■□□□□ 0.66
HADHAP40939 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 RPS2P4-201ENST00000476944 856 ntBASIC19.19■□□□□ 0.66
HADHAP40939 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.19■□□□□ 0.66
HADHAP40939 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.19■□□□□ 0.66
HADHAP40939 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.19■□□□□ 0.66
HADHAP40939 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.19■□□□□ 0.66
HADHAP40939 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.19■□□□□ 0.66
HADHAP40939 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.19■□□□□ 0.66
HADHAP40939 AP001412.1-201ENST00000608405 714 ntBASIC19.19■□□□□ 0.66
HADHAP40939 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.19■□□□□ 0.66
HADHAP40939 AL049812.1-201ENST00000432563 2267 ntBASIC19.19■□□□□ 0.66
HADHAP40939 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HADHAP40939 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.19■□□□□ 0.66
HADHAP40939 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 AC093525.10-201ENST00000625130 1569 ntBASIC19.19■□□□□ 0.66
HADHAP40939 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HADHAP40939 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
HADHAP40939 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
HADHAP40939 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.18■□□□□ 0.66
HADHAP40939 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HADHAP40939 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HADHAP40939 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HADHAP40939 AC004980.1-204ENST00000429707 299 ntBASIC19.18■□□□□ 0.66
HADHAP40939 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.18■□□□□ 0.66
HADHAP40939 AC026271.3-201ENST00000571884 352 ntBASIC19.18■□□□□ 0.66
HADHAP40939 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.18■□□□□ 0.66
HADHAP40939 AL031985.4-201ENST00000642138 673 ntBASIC19.18■□□□□ 0.66
HADHAP40939 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
HADHAP40939 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HADHAP40939 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
HADHAP40939 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HADHAP40939 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HADHAP40939 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HADHAP40939 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
HADHAP40939 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.17■□□□□ 0.66
HADHAP40939 Z85996.1-201ENST00000494644 937 ntBASIC19.17■□□□□ 0.66
HADHAP40939 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.17■□□□□ 0.66
HADHAP40939 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 CR392000.1-201ENST00000624770 1228 ntBASIC19.17■□□□□ 0.66
HADHAP40939 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.17■□□□□ 0.66
HADHAP40939 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HADHAP40939 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.17■□□□□ 0.66
HADHAP40939 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HADHAP40939 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
HADHAP40939 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 IRX1P1-201ENST00000438849 1838 ntBASIC19.16■□□□□ 0.66
HADHAP40939 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms