Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LTB4R2-202ENST00000528054 3092 ntBASIC20.64■□□□□ 0.9
USP8P40818 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
USP8P40818 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
USP8P40818 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP8P40818 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP8P40818 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.64■□□□□ 0.9
USP8P40818 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.64■□□□□ 0.9
USP8P40818 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
USP8P40818 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.64■□□□□ 0.89
USP8P40818 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.64■□□□□ 0.89
USP8P40818 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.64■□□□□ 0.89
USP8P40818 HLA-A-209ENST00000638375 975 ntBASIC20.64■□□□□ 0.89
USP8P40818 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
USP8P40818 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP8P40818 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.63■□□□□ 0.89
USP8P40818 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.63■□□□□ 0.89
USP8P40818 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP8P40818 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
USP8P40818 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP8P40818 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
USP8P40818 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.63■□□□□ 0.89
USP8P40818 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.63■□□□□ 0.89
USP8P40818 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.63■□□□□ 0.89
USP8P40818 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.63■□□□□ 0.89
USP8P40818 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.63■□□□□ 0.89
USP8P40818 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
USP8P40818 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
USP8P40818 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.63■□□□□ 0.89
USP8P40818 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP8P40818 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.62■□□□□ 0.89
USP8P40818 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
USP8P40818 NEFHP1-201ENST00000412845 2629 ntBASIC20.62■□□□□ 0.89
USP8P40818 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
USP8P40818 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.62■□□□□ 0.89
USP8P40818 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.62■□□□□ 0.89
USP8P40818 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.62■□□□□ 0.89
USP8P40818 KRT18P29-201ENST00000397031 1267 ntBASIC20.62■□□□□ 0.89
USP8P40818 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP8P40818 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.62■□□□□ 0.89
USP8P40818 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
USP8P40818 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
USP8P40818 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.62■□□□□ 0.89
USP8P40818 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.62■□□□□ 0.89
USP8P40818 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.62■□□□□ 0.89
USP8P40818 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.62■□□□□ 0.89
USP8P40818 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP8P40818 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP8P40818 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 AC133681.1-201ENST00000465482 601 ntBASIC20.61■□□□□ 0.89
USP8P40818 RPPH1-201ENST00000516869 333 ntBASIC20.61■□□□□ 0.89
USP8P40818 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 AL160286.2-201ENST00000567150 934 ntBASIC20.61■□□□□ 0.89
USP8P40818 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.61■□□□□ 0.89
USP8P40818 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP8P40818 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.61■□□□□ 0.89
USP8P40818 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms