Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE6BP35913 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.38■■□□□ 1.33
PDE6BP35913 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE6BP35913 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE6BP35913 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE6BP35913 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE6BP35913 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDE6BP35913 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE6BP35913 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
PDE6BP35913 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE6BP35913 AC079776.4-201ENST00000511039 504 ntBASIC23.38■■□□□ 1.33
PDE6BP35913 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDE6BP35913 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.38■■□□□ 1.33
PDE6BP35913 AL121912.1-201ENST00000603683 238 ntBASIC23.38■■□□□ 1.33
PDE6BP35913 KRT8P7-201ENST00000533003 1432 ntBASIC23.38■■□□□ 1.33
PDE6BP35913 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PDE6BP35913 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.37■■□□□ 1.33
PDE6BP35913 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDE6BP35913 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PDE6BP35913 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDE6BP35913 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE6BP35913 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.37■■□□□ 1.33
PDE6BP35913 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE6BP35913 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDE6BP35913 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.37■■□□□ 1.33
PDE6BP35913 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.37■■□□□ 1.33
PDE6BP35913 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.37■■□□□ 1.33
PDE6BP35913 AC074051.2-201ENST00000565115 352 ntBASIC23.37■■□□□ 1.33
PDE6BP35913 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.37■■□□□ 1.33
PDE6BP35913 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.37■■□□□ 1.33
PDE6BP35913 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDE6BP35913 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.36■■□□□ 1.33
PDE6BP35913 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.36■■□□□ 1.33
PDE6BP35913 AL391422.3-201ENST00000603791 2761 ntBASIC23.36■■□□□ 1.33
PDE6BP35913 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.36■■□□□ 1.33
PDE6BP35913 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
PDE6BP35913 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.36■■□□□ 1.33
PDE6BP35913 AC005332.3-201ENST00000589904 676 ntBASIC23.36■■□□□ 1.33
PDE6BP35913 IGHV3-41-201ENST00000613121 348 ntBASIC23.36■■□□□ 1.33
PDE6BP35913 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.36■■□□□ 1.33
PDE6BP35913 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
PDE6BP35913 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDE6BP35913 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.36■■□□□ 1.33
PDE6BP35913 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 KRT18P23-201ENST00000435622 1283 ntBASIC23.35■■□□□ 1.33
PDE6BP35913 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.35■■□□□ 1.33
PDE6BP35913 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 AC104390.1-201ENST00000555663 520 ntBASIC23.35■■□□□ 1.33
PDE6BP35913 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.35■■□□□ 1.33
PDE6BP35913 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 AC138894.3-201ENST00000603787 634 ntBASIC23.35■■□□□ 1.33
PDE6BP35913 AL353801.3-201ENST00000609898 542 ntBASIC23.35■■□□□ 1.33
PDE6BP35913 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDE6BP35913 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.35■■□□□ 1.33
PDE6BP35913 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDE6BP35913 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDE6BP35913 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PDE6BP35913 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 AP000593.1-201ENST00000393668 712 ntBASIC23.34■■□□□ 1.33
PDE6BP35913 MRPL3P1-201ENST00000400109 1033 ntBASIC23.34■■□□□ 1.33
PDE6BP35913 KRT16P4-201ENST00000453883 522 ntBASIC23.34■■□□□ 1.33
PDE6BP35913 AP003733.1-201ENST00000491725 852 ntBASIC23.34■■□□□ 1.33
PDE6BP35913 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.34■■□□□ 1.33
PDE6BP35913 AC010240.3-201ENST00000607688 395 ntBASIC23.34■■□□□ 1.33
PDE6BP35913 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms