Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.27■■□□□ 1.32
KCNA3P22001 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
KCNA3P22001 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
KCNA3P22001 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.27■■□□□ 1.32
KCNA3P22001 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.27■■□□□ 1.32
KCNA3P22001 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
KCNA3P22001 AC026310.3-201ENST00000625186 2373 ntBASIC23.27■■□□□ 1.32
KCNA3P22001 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 FAM220CP-201ENST00000395253 831 ntBASIC23.26■■□□□ 1.31
KCNA3P22001 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.26■■□□□ 1.31
KCNA3P22001 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.26■■□□□ 1.31
KCNA3P22001 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.26■■□□□ 1.31
KCNA3P22001 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.26■■□□□ 1.31
KCNA3P22001 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.26■■□□□ 1.31
KCNA3P22001 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.26■■□□□ 1.31
KCNA3P22001 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNA3P22001 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.25■■□□□ 1.31
KCNA3P22001 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.25■■□□□ 1.31
KCNA3P22001 RNPS1P1-201ENST00000507437 918 ntBASIC23.25■■□□□ 1.31
KCNA3P22001 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.25■■□□□ 1.31
KCNA3P22001 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.25■■□□□ 1.31
KCNA3P22001 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.25■■□□□ 1.31
KCNA3P22001 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
KCNA3P22001 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.25■■□□□ 1.31
KCNA3P22001 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
KCNA3P22001 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
KCNA3P22001 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.25■■□□□ 1.31
KCNA3P22001 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.25■■□□□ 1.31
KCNA3P22001 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNA3P22001 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.24■■□□□ 1.31
KCNA3P22001 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.24■■□□□ 1.31
KCNA3P22001 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
KCNA3P22001 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 HMGN1P19-201ENST00000436976 333 ntBASIC23.24■■□□□ 1.31
KCNA3P22001 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.24■■□□□ 1.31
KCNA3P22001 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.24■■□□□ 1.31
KCNA3P22001 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.24■■□□□ 1.31
KCNA3P22001 AC104390.1-201ENST00000555663 520 ntBASIC23.24■■□□□ 1.31
KCNA3P22001 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.24■■□□□ 1.31
KCNA3P22001 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.24■■□□□ 1.31
KCNA3P22001 AL592071.1-201ENST00000611956 408 ntBASIC23.24■■□□□ 1.31
KCNA3P22001 PMS2P7-201ENST00000506558 1336 ntBASIC23.24■■□□□ 1.31
KCNA3P22001 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNA3P22001 KRT8P3-201ENST00000519669 1449 ntBASIC23.24■■□□□ 1.31
KCNA3P22001 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
KCNA3P22001 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.24■■□□□ 1.31
KCNA3P22001 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.24■■□□□ 1.31
KCNA3P22001 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 SDHAP1-207ENST00000440850 2000 ntBASIC23.23■■□□□ 1.31
KCNA3P22001 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNA3P22001 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
KCNA3P22001 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.23■■□□□ 1.31
KCNA3P22001 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNA3P22001 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 AC010240.3-201ENST00000607688 395 ntBASIC23.23■■□□□ 1.31
KCNA3P22001 AC124864.1-201ENST00000623408 392 ntBASIC23.23■■□□□ 1.31
KCNA3P22001 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.23■■□□□ 1.31
KCNA3P22001 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNA3P22001 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.23■■□□□ 1.31
KCNA3P22001 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNA3P22001 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNA3P22001 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNA3P22001 ZNF815P-204ENST00000434898 1737 ntBASIC23.22■■□□□ 1.31
KCNA3P22001 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
KCNA3P22001 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms