Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CD58P19256 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.37■□□□□ 0.85
CD58P19256 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.37■□□□□ 0.85
CD58P19256 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 MFAP1P1-201ENST00000442257 1255 ntBASIC20.37■□□□□ 0.85
CD58P19256 PRSS44-201ENST00000515154 1146 ntBASIC20.37■□□□□ 0.85
CD58P19256 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 CKBP1-201ENST00000565489 1086 ntBASIC20.37■□□□□ 0.85
CD58P19256 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.37■□□□□ 0.85
CD58P19256 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.37■□□□□ 0.85
CD58P19256 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CD58P19256 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
CD58P19256 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CD58P19256 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 FEM1AP3-201ENST00000403722 1741 ntBASIC20.36■□□□□ 0.85
CD58P19256 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CD58P19256 AL020996.1-203ENST00000536896 2307 ntBASIC20.36■□□□□ 0.85
CD58P19256 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CD58P19256 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CD58P19256 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CD58P19256 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 MIR1238-201ENST00000408483 83 ntBASIC20.36■□□□□ 0.85
CD58P19256 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.36■□□□□ 0.85
CD58P19256 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CD58P19256 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.36■□□□□ 0.85
CD58P19256 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CD58P19256 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD58P19256 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CD58P19256 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CD58P19256 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.35■□□□□ 0.85
CD58P19256 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.35■□□□□ 0.85
CD58P19256 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.35■□□□□ 0.85
CD58P19256 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.35■□□□□ 0.85
CD58P19256 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD58P19256 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.34■□□□□ 0.85
CD58P19256 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 TNXA-203ENST00000507684 2038 ntBASIC20.34■□□□□ 0.85
CD58P19256 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CD58P19256 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.34■□□□□ 0.85
CD58P19256 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.34■□□□□ 0.85
CD58P19256 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.34■□□□□ 0.85
CD58P19256 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CD58P19256 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.34■□□□□ 0.85
CD58P19256 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD58P19256 AC096733.2-201ENST00000609937 1394 ntBASIC20.34■□□□□ 0.85
CD58P19256 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CD58P19256 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.33■□□□□ 0.85
CD58P19256 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CD58P19256 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.33■□□□□ 0.85
CD58P19256 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.33■□□□□ 0.85
CD58P19256 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.33■□□□□ 0.85
CD58P19256 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD58P19256 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.33■□□□□ 0.84
CD58P19256 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD58P19256 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms