Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
KRT4P19013 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT4P19013 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT4P19013 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT4P19013 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 AC067852.2-201ENST00000590513 2313 ntBASIC19.04■□□□□ 0.64
KRT4P19013 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT4P19013 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT4P19013 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
KRT4P19013 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT4P19013 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT4P19013 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT4P19013 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT4P19013 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT4P19013 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
KRT4P19013 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT4P19013 AC004911.1-201ENST00000416316 871 ntBASIC19.03■□□□□ 0.64
KRT4P19013 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT4P19013 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.03■□□□□ 0.64
KRT4P19013 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT4P19013 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.03■□□□□ 0.64
KRT4P19013 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT4P19013 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT4P19013 RAP2CP1-201ENST00000605103 478 ntBASIC19.03■□□□□ 0.64
KRT4P19013 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT4P19013 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT4P19013 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT4P19013 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT4P19013 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT4P19013 AC126763.1-201ENST00000552015 2118 ntBASIC19.03■□□□□ 0.64
KRT4P19013 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
KRT4P19013 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT4P19013 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
KRT4P19013 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.02■□□□□ 0.64
KRT4P19013 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT4P19013 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT4P19013 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT4P19013 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
KRT4P19013 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT4P19013 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.02■□□□□ 0.64
KRT4P19013 AL121906.2-201ENST00000621597 723 ntBASIC19.02■□□□□ 0.64
KRT4P19013 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
KRT4P19013 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.63
KRT4P19013 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT4P19013 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT4P19013 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT4P19013 AC073592.3-201ENST00000625118 1834 ntBASIC19.02■□□□□ 0.63
KRT4P19013 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.02■□□□□ 0.63
KRT4P19013 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT4P19013 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT4P19013 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT4P19013 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT4P19013 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
KRT4P19013 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
KRT4P19013 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KRT4P19013 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT4P19013 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
KRT4P19013 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KRT4P19013 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT4P19013 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT4P19013 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT4P19013 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT4P19013 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT4P19013 KRT18P16-201ENST00000510337 1294 ntBASIC19.01■□□□□ 0.63
KRT4P19013 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.01■□□□□ 0.63
KRT4P19013 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.01■□□□□ 0.63
KRT4P19013 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.01■□□□□ 0.63
KRT4P19013 AC105036.2-201ENST00000569468 176 ntBASIC19.01■□□□□ 0.63
KRT4P19013 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT4P19013 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT4P19013 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms