Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 UPK3BP1-201ENST00000428678 509 ntBASIC19.18■□□□□ 0.66
HLA-EP13747 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-EP13747 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-EP13747 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-EP13747 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-EP13747 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-EP13747 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-EP13747 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.18■□□□□ 0.66
HLA-EP13747 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-EP13747 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-EP13747 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HLA-EP13747 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HLA-EP13747 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-EP13747 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.17■□□□□ 0.66
HLA-EP13747 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-EP13747 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-EP13747 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-EP13747 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.17■□□□□ 0.66
HLA-EP13747 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 AL671277.2-201ENST00000458060 996 ntBASIC19.17■□□□□ 0.66
HLA-EP13747 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-EP13747 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HLA-EP13747 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-EP13747 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.17■□□□□ 0.66
HLA-EP13747 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-EP13747 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-EP13747 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-EP13747 AP000523.1-201ENST00000398242 1049 ntBASIC19.16■□□□□ 0.66
HLA-EP13747 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-EP13747 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-EP13747 AC091076.1-201ENST00000610741 619 ntBASIC19.16■□□□□ 0.66
HLA-EP13747 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-EP13747 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HLA-EP13747 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-EP13747 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-EP13747 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-EP13747 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 AC036111.1-201ENST00000533973 1582 ntBASIC19.15■□□□□ 0.66
HLA-EP13747 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HLA-EP13747 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-EP13747 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-EP13747 AL023284.2-201ENST00000405850 579 ntBASIC19.15■□□□□ 0.66
HLA-EP13747 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.15■□□□□ 0.66
HLA-EP13747 FAM86EP-206ENST00000510506 987 ntBASIC19.15■□□□□ 0.66
HLA-EP13747 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-EP13747 NEK4P2-201ENST00000580004 1012 ntBASIC19.15■□□□□ 0.66
HLA-EP13747 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HLA-EP13747 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-EP13747 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
HLA-EP13747 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-EP13747 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HLA-EP13747 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-EP13747 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-EP13747 TEX21P-204ENST00000641479 1693 ntBASIC19.14■□□□□ 0.66
HLA-EP13747 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
HLA-EP13747 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-EP13747 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-EP13747 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-EP13747 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms