Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 AC009113.1-201ENST00000570267 2443 ntBASIC16.64■□□□□ 0.25
UBCP0CG48 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.64■□□□□ 0.25
UBCP0CG48 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.64■□□□□ 0.25
UBCP0CG48 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
UBCP0CG48 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
UBCP0CG48 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
UBCP0CG48 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.63■□□□□ 0.25
UBCP0CG48 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.63■□□□□ 0.25
UBCP0CG48 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.63■□□□□ 0.25
UBCP0CG48 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.63■□□□□ 0.25
UBCP0CG48 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.63■□□□□ 0.25
UBCP0CG48 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.63■□□□□ 0.25
UBCP0CG48 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.63■□□□□ 0.25
UBCP0CG48 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.63■□□□□ 0.25
UBCP0CG48 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBCP0CG48 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.62■□□□□ 0.25
UBCP0CG48 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
UBCP0CG48 AC104581.1-202ENST00000635932 2618 ntBASIC16.62■□□□□ 0.25
UBCP0CG48 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.62■□□□□ 0.25
UBCP0CG48 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.62■□□□□ 0.25
UBCP0CG48 PRKY-204ENST00000533551 1019 ntBASIC16.62■□□□□ 0.25
UBCP0CG48 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.62■□□□□ 0.25
UBCP0CG48 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.62■□□□□ 0.25
UBCP0CG48 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBCP0CG48 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBCP0CG48 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.62■□□□□ 0.25
UBCP0CG48 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.61■□□□□ 0.25
UBCP0CG48 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms