Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.23■□□□□ 0.35
FREM3P0C091 AC009947.2-201ENST00000444014 672 ntBASIC17.23■□□□□ 0.35
FREM3P0C091 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.23■□□□□ 0.35
FREM3P0C091 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.23■□□□□ 0.35
FREM3P0C091 AC083849.1-201ENST00000615227 514 ntBASIC17.23■□□□□ 0.35
FREM3P0C091 AC010653.2-201ENST00000623505 997 ntBASIC17.23■□□□□ 0.35
FREM3P0C091 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.22■□□□□ 0.35
FREM3P0C091 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FREM3P0C091 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
FREM3P0C091 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM3P0C091 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FREM3P0C091 KRT18P35-201ENST00000510488 1269 ntBASIC17.22■□□□□ 0.35
FREM3P0C091 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.22■□□□□ 0.35
FREM3P0C091 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
FREM3P0C091 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 RNF165-205ENST00000588679 2904 ntBASIC17.22■□□□□ 0.35
FREM3P0C091 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM3P0C091 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM3P0C091 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.22■□□□□ 0.35
FREM3P0C091 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FREM3P0C091 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.22■□□□□ 0.35
FREM3P0C091 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FREM3P0C091 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.22■□□□□ 0.35
FREM3P0C091 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.21■□□□□ 0.35
FREM3P0C091 CCR12P-201ENST00000446203 998 ntBASIC17.21■□□□□ 0.35
FREM3P0C091 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 AC010331.1-201ENST00000611423 582 ntBASIC17.21■□□□□ 0.35
FREM3P0C091 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
FREM3P0C091 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM3P0C091 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.21■□□□□ 0.35
FREM3P0C091 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
FREM3P0C091 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM3P0C091 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
FREM3P0C091 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.21■□□□□ 0.35
FREM3P0C091 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.21■□□□□ 0.35
FREM3P0C091 WWOX-216ENST00000569818 525 ntBASIC17.21■□□□□ 0.35
FREM3P0C091 AC008622.2-201ENST00000617006 1229 ntBASIC17.21■□□□□ 0.35
FREM3P0C091 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
FREM3P0C091 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FREM3P0C091 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
FREM3P0C091 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.21■□□□□ 0.34
FREM3P0C091 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM3P0C091 CKBP1-201ENST00000565489 1086 ntBASIC17.2■□□□□ 0.34
FREM3P0C091 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM3P0C091 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.2■□□□□ 0.34
FREM3P0C091 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FREM3P0C091 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.2■□□□□ 0.34
FREM3P0C091 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.2■□□□□ 0.34
FREM3P0C091 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.2■□□□□ 0.34
FREM3P0C091 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 DUX4L26-201ENST00000489078 1255 ntBASIC17.2■□□□□ 0.34
FREM3P0C091 AC022616.7-201ENST00000525383 220 ntBASIC17.2■□□□□ 0.34
FREM3P0C091 AL353719.1-201ENST00000566847 864 ntBASIC17.2■□□□□ 0.34
FREM3P0C091 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FREM3P0C091 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FREM3P0C091 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 AC004408.2-201ENST00000623613 2777 ntBASIC17.19■□□□□ 0.34
FREM3P0C091 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms