Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.44■■□□□ 1.02
HOXC6P09630 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.44■■□□□ 1.02
HOXC6P09630 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.44■■□□□ 1.02
HOXC6P09630 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.44■■□□□ 1.02
HOXC6P09630 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.44■■□□□ 1.02
HOXC6P09630 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
HOXC6P09630 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.44■■□□□ 1.02
HOXC6P09630 MIR3917-201ENST00000580971 93 ntBASIC21.44■■□□□ 1.02
HOXC6P09630 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.44■■□□□ 1.02
HOXC6P09630 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.44■■□□□ 1.02
HOXC6P09630 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 KRT8P10-201ENST00000450021 1447 ntBASIC21.44■■□□□ 1.02
HOXC6P09630 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HOXC6P09630 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
HOXC6P09630 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC6P09630 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC6P09630 PVRIG2P-201ENST00000435460 978 ntBASIC21.43■■□□□ 1.02
HOXC6P09630 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.43■■□□□ 1.02
HOXC6P09630 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.43■■□□□ 1.02
HOXC6P09630 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC6P09630 AL157888.1-201ENST00000631930 593 ntBASIC21.43■■□□□ 1.02
HOXC6P09630 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC6P09630 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC6P09630 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HOXC6P09630 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC6P09630 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.43■■□□□ 1.02
HOXC6P09630 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
HOXC6P09630 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
HOXC6P09630 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.42■■□□□ 1.02
HOXC6P09630 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 TCF3P1-201ENST00000423021 1937 ntBASIC21.42■■□□□ 1.02
HOXC6P09630 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.42■■□□□ 1.02
HOXC6P09630 DRAXINP1-201ENST00000437611 948 ntBASIC21.42■■□□□ 1.02
HOXC6P09630 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.42■■□□□ 1.02
HOXC6P09630 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.42■■□□□ 1.02
HOXC6P09630 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.42■■□□□ 1.02
HOXC6P09630 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.42■■□□□ 1.02
HOXC6P09630 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HOXC6P09630 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HOXC6P09630 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.42■■□□□ 1.02
HOXC6P09630 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 AL136038.4-201ENST00000603606 1261 ntBASIC21.42■■□□□ 1.02
HOXC6P09630 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HOXC6P09630 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 AC112497.1-201ENST00000624824 639 ntBASIC21.42■■□□□ 1.02
HOXC6P09630 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.42■■□□□ 1.02
HOXC6P09630 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC6P09630 AC112907.3-201ENST00000577781 2400 ntBASIC21.41■■□□□ 1.02
HOXC6P09630 AL391807.1-203ENST00000604392 2365 ntBASIC21.41■■□□□ 1.02
HOXC6P09630 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HOXC6P09630 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.41■■□□□ 1.02
HOXC6P09630 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 TSPY19P-201ENST00000418461 509 ntBASIC21.41■■□□□ 1.02
HOXC6P09630 TSPY18P-201ENST00000441642 509 ntBASIC21.41■■□□□ 1.02
HOXC6P09630 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.41■■□□□ 1.02
HOXC6P09630 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.41■■□□□ 1.02
HOXC6P09630 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC6P09630 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC6P09630 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms