Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.12■□□□□ 0.65
RETP07949 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.12■□□□□ 0.65
RETP07949 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RETP07949 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.12■□□□□ 0.65
RETP07949 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RETP07949 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RETP07949 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.12■□□□□ 0.65
RETP07949 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
RETP07949 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.11■□□□□ 0.65
RETP07949 PHGDH-210ENST00000641115 1638 ntBASIC19.11■□□□□ 0.65
RETP07949 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.11■□□□□ 0.65
RETP07949 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.11■□□□□ 0.65
RETP07949 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.11■□□□□ 0.65
RETP07949 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
RETP07949 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.11■□□□□ 0.65
RETP07949 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.11■□□□□ 0.65
RETP07949 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.11■□□□□ 0.65
RETP07949 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
RETP07949 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RETP07949 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
RETP07949 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.11■□□□□ 0.65
RETP07949 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RETP07949 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.11■□□□□ 0.65
RETP07949 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RETP07949 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RETP07949 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.1■□□□□ 0.65
RETP07949 UNC93B7-201ENST00000509439 705 ntBASIC19.1■□□□□ 0.65
RETP07949 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.1■□□□□ 0.65
RETP07949 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.1■□□□□ 0.65
RETP07949 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.1■□□□□ 0.65
RETP07949 AL160286.2-201ENST00000567150 934 ntBASIC19.1■□□□□ 0.65
RETP07949 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.1■□□□□ 0.65
RETP07949 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.1■□□□□ 0.65
RETP07949 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RETP07949 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RETP07949 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RETP07949 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RETP07949 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.09■□□□□ 0.65
RETP07949 BX323043.1-201ENST00000641006 1765 ntBASIC19.09■□□□□ 0.65
RETP07949 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.09■□□□□ 0.65
RETP07949 AL645929.1-201ENST00000420084 975 ntBASIC19.09■□□□□ 0.65
RETP07949 SPDYE15P-201ENST00000424157 909 ntBASIC19.09■□□□□ 0.65
RETP07949 SPDYE13P-201ENST00000445314 798 ntBASIC19.09■□□□□ 0.65
RETP07949 TSSC2-201ENST00000450217 709 ntBASIC19.09■□□□□ 0.65
RETP07949 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
RETP07949 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.09■□□□□ 0.65
RETP07949 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RETP07949 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RETP07949 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
RETP07949 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RETP07949 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RETP07949 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.09■□□□□ 0.65
RETP07949 KRT8P8-201ENST00000434750 1448 ntBASIC19.08■□□□□ 0.65
RETP07949 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RETP07949 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RETP07949 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms