Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDGFAP04085 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFAP04085 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFAP04085 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFAP04085 AL512604.3-201ENST00000569583 964 ntBASIC17.71■□□□□ 0.43
PDGFAP04085 CLEC4GP1-201ENST00000596555 870 ntBASIC17.71■□□□□ 0.43
PDGFAP04085 AC008622.2-201ENST00000617006 1229 ntBASIC17.71■□□□□ 0.43
PDGFAP04085 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFAP04085 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFAP04085 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFAP04085 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFAP04085 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFAP04085 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFAP04085 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFAP04085 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
PDGFAP04085 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFAP04085 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFAP04085 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PDGFAP04085 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFAP04085 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PDGFAP04085 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PDGFAP04085 AC026396.1-201ENST00000419388 421 ntBASIC17.7■□□□□ 0.42
PDGFAP04085 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFAP04085 CA15P1-201ENST00000481698 905 ntBASIC17.7■□□□□ 0.42
PDGFAP04085 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.7■□□□□ 0.42
PDGFAP04085 CKBP1-201ENST00000565489 1086 ntBASIC17.7■□□□□ 0.42
PDGFAP04085 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFAP04085 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFAP04085 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 PCDHAC2-203ENST00000615316 3011 ntBASIC17.7■□□□□ 0.42
PDGFAP04085 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDGFAP04085 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFAP04085 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFAP04085 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDGFAP04085 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDGFAP04085 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PDGFAP04085 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
PDGFAP04085 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFAP04085 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 KRT8P41-201ENST00000533985 1514 ntBASIC17.69■□□□□ 0.42
PDGFAP04085 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFAP04085 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.69■□□□□ 0.42
PDGFAP04085 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFAP04085 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.69■□□□□ 0.42
PDGFAP04085 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFAP04085 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.69■□□□□ 0.42
PDGFAP04085 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.69■□□□□ 0.42
PDGFAP04085 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFAP04085 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFAP04085 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDGFAP04085 BX119927.1-201ENST00000636596 1552 ntBASIC17.69■□□□□ 0.42
PDGFAP04085 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFAP04085 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDGFAP04085 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PDGFAP04085 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms