Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.81■□□□□ 0.92
VTNP04004 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
VTNP04004 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.8■□□□□ 0.92
VTNP04004 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.8■□□□□ 0.92
VTNP04004 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
VTNP04004 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VTNP04004 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VTNP04004 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.8■□□□□ 0.92
VTNP04004 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.8■□□□□ 0.92
VTNP04004 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VTNP04004 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.8■□□□□ 0.92
VTNP04004 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VTNP04004 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.8■□□□□ 0.92
VTNP04004 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.79■□□□□ 0.92
VTNP04004 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.79■□□□□ 0.92
VTNP04004 SPDYE15P-201ENST00000424157 909 ntBASIC20.79■□□□□ 0.92
VTNP04004 MCCD1P1-208ENST00000445732 328 ntBASIC20.79■□□□□ 0.92
VTNP04004 AC112907.2-201ENST00000448639 330 ntBASIC20.79■□□□□ 0.92
VTNP04004 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.79■□□□□ 0.92
VTNP04004 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
VTNP04004 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
VTNP04004 AL121956.5-201ENST00000625261 221 ntBASIC20.79■□□□□ 0.92
VTNP04004 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
VTNP04004 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTNP04004 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.78■□□□□ 0.92
VTNP04004 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VTNP04004 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.78■□□□□ 0.92
VTNP04004 PCED1CP-201ENST00000419887 785 ntBASIC20.78■□□□□ 0.92
VTNP04004 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
VTNP04004 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.78■□□□□ 0.92
VTNP04004 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
VTNP04004 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.78■□□□□ 0.92
VTNP04004 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.78■□□□□ 0.92
VTNP04004 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
VTNP04004 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTNP04004 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.77■□□□□ 0.92
VTNP04004 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.77■□□□□ 0.92
VTNP04004 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VTNP04004 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.77■□□□□ 0.92
VTNP04004 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.77■□□□□ 0.92
VTNP04004 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.77■□□□□ 0.92
VTNP04004 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 STARP1-201ENST00000397973 869 ntBASIC20.77■□□□□ 0.92
VTNP04004 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.77■□□□□ 0.92
VTNP04004 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.77■□□□□ 0.92
VTNP04004 AC024243.1-201ENST00000609234 778 ntBASIC20.77■□□□□ 0.92
VTNP04004 AP000550.4-202ENST00000639755 178 ntBASIC20.77■□□□□ 0.92
VTNP04004 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
VTNP04004 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTNP04004 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VTNP04004 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
VTNP04004 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms