Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.78■□□□□ 0.76
OPHN1O60890 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OPHN1O60890 AC141586.3-201ENST00000562166 1838 ntBASIC19.78■□□□□ 0.76
OPHN1O60890 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
OPHN1O60890 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
OPHN1O60890 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
OPHN1O60890 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OPHN1O60890 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.78■□□□□ 0.76
OPHN1O60890 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OPHN1O60890 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
OPHN1O60890 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.78■□□□□ 0.76
OPHN1O60890 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
OPHN1O60890 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.77■□□□□ 0.76
OPHN1O60890 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
OPHN1O60890 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
OPHN1O60890 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
OPHN1O60890 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
OPHN1O60890 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.77■□□□□ 0.76
OPHN1O60890 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
OPHN1O60890 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.77■□□□□ 0.76
OPHN1O60890 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.77■□□□□ 0.76
OPHN1O60890 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.77■□□□□ 0.76
OPHN1O60890 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.77■□□□□ 0.76
OPHN1O60890 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.77■□□□□ 0.76
OPHN1O60890 TEX21P-204ENST00000641479 1693 ntBASIC19.77■□□□□ 0.76
OPHN1O60890 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
OPHN1O60890 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
OPHN1O60890 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
OPHN1O60890 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.76■□□□□ 0.75
OPHN1O60890 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.76■□□□□ 0.75
OPHN1O60890 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.76■□□□□ 0.75
OPHN1O60890 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.76■□□□□ 0.75
OPHN1O60890 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
OPHN1O60890 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
OPHN1O60890 NUDT16P1-203ENST00000513809 620 ntBASIC19.76■□□□□ 0.75
OPHN1O60890 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
OPHN1O60890 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.76■□□□□ 0.75
OPHN1O60890 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.76■□□□□ 0.75
OPHN1O60890 AC004264.1-201ENST00000608354 794 ntBASIC19.76■□□□□ 0.75
OPHN1O60890 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.76■□□□□ 0.75
OPHN1O60890 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
OPHN1O60890 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
OPHN1O60890 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
OPHN1O60890 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OPHN1O60890 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.76■□□□□ 0.75
OPHN1O60890 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
OPHN1O60890 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 TNXA-203ENST00000507684 2038 ntBASIC19.75■□□□□ 0.75
OPHN1O60890 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 LINC01568-207ENST00000641790 1380 ntBASIC19.75■□□□□ 0.75
OPHN1O60890 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.75■□□□□ 0.75
OPHN1O60890 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.75■□□□□ 0.75
OPHN1O60890 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.75■□□□□ 0.75
OPHN1O60890 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.75■□□□□ 0.75
OPHN1O60890 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.75■□□□□ 0.75
OPHN1O60890 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
OPHN1O60890 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OPHN1O60890 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
OPHN1O60890 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.74■□□□□ 0.75
OPHN1O60890 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
OPHN1O60890 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
OPHN1O60890 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
OPHN1O60890 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
OPHN1O60890 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
OPHN1O60890 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
OPHN1O60890 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
OPHN1O60890 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms