Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.9■■□□□ 1.42
CACNA1FO60840 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.9■■□□□ 1.42
CACNA1FO60840 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CACNA1FO60840 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.89■■□□□ 1.42
CACNA1FO60840 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CACNA1FO60840 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CACNA1FO60840 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CACNA1FO60840 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.89■■□□□ 1.42
CACNA1FO60840 AC034236.2-201ENST00000606662 1610 ntBASIC23.89■■□□□ 1.42
CACNA1FO60840 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CACNA1FO60840 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CACNA1FO60840 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.89■■□□□ 1.42
CACNA1FO60840 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.89■■□□□ 1.42
CACNA1FO60840 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CACNA1FO60840 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CACNA1FO60840 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CACNA1FO60840 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.89■■□□□ 1.41
CACNA1FO60840 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.89■■□□□ 1.41
CACNA1FO60840 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.88■■□□□ 1.41
CACNA1FO60840 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CACNA1FO60840 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.88■■□□□ 1.41
CACNA1FO60840 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.88■■□□□ 1.41
CACNA1FO60840 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 AL137013.1-201ENST00000432946 1228 ntBASIC23.88■■□□□ 1.41
CACNA1FO60840 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.88■■□□□ 1.41
CACNA1FO60840 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.88■■□□□ 1.41
CACNA1FO60840 AL441883.1-201ENST00000566170 1045 ntBASIC23.88■■□□□ 1.41
CACNA1FO60840 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CACNA1FO60840 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.88■■□□□ 1.41
CACNA1FO60840 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.88■■□□□ 1.41
CACNA1FO60840 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CACNA1FO60840 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.87■■□□□ 1.41
CACNA1FO60840 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.87■■□□□ 1.41
CACNA1FO60840 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.87■■□□□ 1.41
CACNA1FO60840 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.87■■□□□ 1.41
CACNA1FO60840 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.87■■□□□ 1.41
CACNA1FO60840 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.87■■□□□ 1.41
CACNA1FO60840 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 ANO7L1-203ENST00000602586 1720 ntBASIC23.87■■□□□ 1.41
CACNA1FO60840 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.87■■□□□ 1.41
CACNA1FO60840 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.87■■□□□ 1.41
CACNA1FO60840 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CACNA1FO60840 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.87■■□□□ 1.41
CACNA1FO60840 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CACNA1FO60840 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.87■■□□□ 1.41
CACNA1FO60840 AL445228.2-201ENST00000605589 952 ntBASIC23.87■■□□□ 1.41
CACNA1FO60840 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CACNA1FO60840 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
CACNA1FO60840 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.86■■□□□ 1.41
CACNA1FO60840 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.86■■□□□ 1.41
CACNA1FO60840 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.86■■□□□ 1.41
CACNA1FO60840 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.86■■□□□ 1.41
CACNA1FO60840 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CACNA1FO60840 AC093525.10-201ENST00000625130 1569 ntBASIC23.86■■□□□ 1.41
CACNA1FO60840 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 AC112907.2-201ENST00000448639 330 ntBASIC23.85■■□□□ 1.41
CACNA1FO60840 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.85■■□□□ 1.41
CACNA1FO60840 AC116407.4-201ENST00000623319 1061 ntBASIC23.85■■□□□ 1.41
CACNA1FO60840 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CACNA1FO60840 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CACNA1FO60840 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CACNA1FO60840 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.85■■□□□ 1.41
CACNA1FO60840 AC104076.2-201ENST00000448912 469 ntBASIC23.85■■□□□ 1.41
CACNA1FO60840 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms