Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZIC3O60481 AL049812.1-201ENST00000432563 2267 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ZIC3O60481 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC3O60481 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC3O60481 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC3O60481 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.07■□□□□ 0.32
ZIC3O60481 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ZIC3O60481 AL023284.2-201ENST00000405850 579 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.07■□□□□ 0.32
ZIC3O60481 KRT18P57-201ENST00000443599 1254 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.07■□□□□ 0.32
ZIC3O60481 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZIC3O60481 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.07■□□□□ 0.32
ZIC3O60481 RN7SL850P-201ENST00000579959 291 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
ZIC3O60481 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
ZIC3O60481 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.07■□□□□ 0.32
ZIC3O60481 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC3O60481 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC3O60481 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.07■□□□□ 0.32
ZIC3O60481 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.07■□□□□ 0.32
ZIC3O60481 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ZIC3O60481 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC3O60481 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC3O60481 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
ZIC3O60481 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.06■□□□□ 0.32
ZIC3O60481 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.06■□□□□ 0.32
ZIC3O60481 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZIC3O60481 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 AL512353.2-201ENST00000448759 1962 ntBASIC17.06■□□□□ 0.32
ZIC3O60481 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC3O60481 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC3O60481 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.06■□□□□ 0.32
ZIC3O60481 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 ATP5G1P1-201ENST00000448724 379 ntBASIC17.06■□□□□ 0.32
ZIC3O60481 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZIC3O60481 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.06■□□□□ 0.32
ZIC3O60481 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC3O60481 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.05■□□□□ 0.32
ZIC3O60481 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ZIC3O60481 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC3O60481 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZIC3O60481 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 TMPOP1-202ENST00000424642 1267 ntBASIC17.05■□□□□ 0.32
ZIC3O60481 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.05■□□□□ 0.32
ZIC3O60481 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ZIC3O60481 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
ZIC3O60481 AL512604.3-201ENST00000569583 964 ntBASIC17.05■□□□□ 0.32
ZIC3O60481 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC3O60481 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ZIC3O60481 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ZIC3O60481 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.05■□□□□ 0.32
ZIC3O60481 KRT8P32-201ENST00000512863 1461 ntBASIC17.05■□□□□ 0.32
ZIC3O60481 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC3O60481 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ZIC3O60481 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC3O60481 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC3O60481 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZIC3O60481 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms