Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PEX1O43933 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX1O43933 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.46■□□□□ 0.55
PEX1O43933 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PEX1O43933 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PEX1O43933 C1QBPP2-201ENST00000528754 825 ntBASIC18.46■□□□□ 0.55
PEX1O43933 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.46■□□□□ 0.55
PEX1O43933 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 AC233263.1-201ENST00000578059 224 ntBASIC18.46■□□□□ 0.55
PEX1O43933 RN7SL471P-201ENST00000580476 299 ntBASIC18.46■□□□□ 0.55
PEX1O43933 AC069544.1-201ENST00000609399 999 ntBASIC18.46■□□□□ 0.55
PEX1O43933 AL359736.2-201ENST00000621992 437 ntBASIC18.46■□□□□ 0.55
PEX1O43933 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX1O43933 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX1O43933 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.46■□□□□ 0.55
PEX1O43933 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PEX1O43933 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PEX1O43933 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PEX1O43933 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PEX1O43933 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PEX1O43933 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PEX1O43933 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PEX1O43933 RPPH1-201ENST00000516869 333 ntBASIC18.45■□□□□ 0.54
PEX1O43933 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.45■□□□□ 0.54
PEX1O43933 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX1O43933 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PEX1O43933 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX1O43933 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.45■□□□□ 0.54
PEX1O43933 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PEX1O43933 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PEX1O43933 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.44■□□□□ 0.54
PEX1O43933 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.44■□□□□ 0.54
PEX1O43933 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.44■□□□□ 0.54
PEX1O43933 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.44■□□□□ 0.54
PEX1O43933 AC120498.8-201ENST00000614275 531 ntBASIC18.44■□□□□ 0.54
PEX1O43933 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 FAM197Y4-202ENST00000622692 608 ntBASIC18.44■□□□□ 0.54
PEX1O43933 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX1O43933 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms