Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXTL3O43909 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXTL3O43909 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EXTL3O43909 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.59■□□□□ 0.89
EXTL3O43909 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.59■□□□□ 0.89
EXTL3O43909 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXTL3O43909 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXTL3O43909 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EXTL3O43909 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXTL3O43909 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
EXTL3O43909 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.58■□□□□ 0.89
EXTL3O43909 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.58■□□□□ 0.89
EXTL3O43909 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EXTL3O43909 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
EXTL3O43909 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.58■□□□□ 0.89
EXTL3O43909 CCR12P-201ENST00000446203 998 ntBASIC20.58■□□□□ 0.89
EXTL3O43909 TSPY17P-201ENST00000450329 467 ntBASIC20.58■□□□□ 0.89
EXTL3O43909 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.58■□□□□ 0.89
EXTL3O43909 AL353719.1-201ENST00000566847 864 ntBASIC20.58■□□□□ 0.89
EXTL3O43909 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.58■□□□□ 0.89
EXTL3O43909 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXTL3O43909 AC116562.4-202ENST00000641738 218 ntBASIC20.58■□□□□ 0.89
EXTL3O43909 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EXTL3O43909 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
EXTL3O43909 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.58■□□□□ 0.88
EXTL3O43909 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EXTL3O43909 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.57■□□□□ 0.88
EXTL3O43909 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.57■□□□□ 0.88
EXTL3O43909 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
EXTL3O43909 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
EXTL3O43909 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 AC092338.2-201ENST00000568827 1415 ntBASIC20.57■□□□□ 0.88
EXTL3O43909 AC008622.2-201ENST00000617006 1229 ntBASIC20.57■□□□□ 0.88
EXTL3O43909 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 AC097493.4-201ENST00000641197 219 ntBASIC20.57■□□□□ 0.88
EXTL3O43909 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
EXTL3O43909 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.57■□□□□ 0.88
EXTL3O43909 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXTL3O43909 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.57■□□□□ 0.88
EXTL3O43909 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
EXTL3O43909 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EXTL3O43909 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EXTL3O43909 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.56■□□□□ 0.88
EXTL3O43909 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.56■□□□□ 0.88
EXTL3O43909 RCN1P1-201ENST00000400413 996 ntBASIC20.56■□□□□ 0.88
EXTL3O43909 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.56■□□□□ 0.88
EXTL3O43909 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.56■□□□□ 0.88
EXTL3O43909 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
EXTL3O43909 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.56■□□□□ 0.88
EXTL3O43909 AC012306.2-201ENST00000609350 630 ntBASIC20.56■□□□□ 0.88
EXTL3O43909 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.56■□□□□ 0.88
EXTL3O43909 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EXTL3O43909 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 LINC01568-207ENST00000641790 1380 ntBASIC20.56■□□□□ 0.88
EXTL3O43909 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXTL3O43909 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EXTL3O43909 AL512353.2-201ENST00000448759 1962 ntBASIC20.55■□□□□ 0.88
EXTL3O43909 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EXTL3O43909 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
EXTL3O43909 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.55■□□□□ 0.88
EXTL3O43909 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.55■□□□□ 0.88
EXTL3O43909 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXTL3O43909 INGX-201ENST00000359239 846 ntBASIC20.55■□□□□ 0.88
EXTL3O43909 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms