Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP2AO43633 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2AO43633 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHMP2AO43633 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2AO43633 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2AO43633 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP2AO43633 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CHMP2AO43633 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2AO43633 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2AO43633 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2AO43633 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.33■■□□□ 1.01
CHMP2AO43633 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2AO43633 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2AO43633 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.33■■□□□ 1.01
CHMP2AO43633 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CHMP2AO43633 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.33■■□□□ 1.01
CHMP2AO43633 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP2AO43633 FAM210CP-201ENST00000445714 574 ntBASIC21.33■■□□□ 1.01
CHMP2AO43633 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CHMP2AO43633 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP2AO43633 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP2AO43633 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.33■■□□□ 1
CHMP2AO43633 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.32■■□□□ 1
CHMP2AO43633 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.32■■□□□ 1
CHMP2AO43633 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CHMP2AO43633 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.32■■□□□ 1
CHMP2AO43633 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.32■■□□□ 1
CHMP2AO43633 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
CHMP2AO43633 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CHMP2AO43633 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHMP2AO43633 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
CHMP2AO43633 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.32■■□□□ 1
CHMP2AO43633 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CHMP2AO43633 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHMP2AO43633 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.32■■□□□ 1
CHMP2AO43633 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.32■■□□□ 1
CHMP2AO43633 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP2AO43633 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.31■■□□□ 1
CHMP2AO43633 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.31■■□□□ 1
CHMP2AO43633 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 LIN28AP1-201ENST00000429574 405 ntBASIC21.31■■□□□ 1
CHMP2AO43633 ATP5G1P1-201ENST00000448724 379 ntBASIC21.31■■□□□ 1
CHMP2AO43633 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.31■■□□□ 1
CHMP2AO43633 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.31■■□□□ 1
CHMP2AO43633 AC008622.2-201ENST00000617006 1229 ntBASIC21.31■■□□□ 1
CHMP2AO43633 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CHMP2AO43633 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2AO43633 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.3■■□□□ 1
CHMP2AO43633 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.3■■□□□ 1
CHMP2AO43633 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.3■■□□□ 1
CHMP2AO43633 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.3■■□□□ 1
CHMP2AO43633 HMGA1P5-201ENST00000412453 271 ntBASIC21.3■■□□□ 1
CHMP2AO43633 TMPOP1-202ENST00000424642 1267 ntBASIC21.3■■□□□ 1
CHMP2AO43633 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.3■■□□□ 1
CHMP2AO43633 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.3■■□□□ 1
CHMP2AO43633 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.3■■□□□ 1
CHMP2AO43633 MIR4674-201ENST00000582457 87 ntBASIC21.3■■□□□ 1
CHMP2AO43633 AC010653.2-201ENST00000623505 997 ntBASIC21.3■■□□□ 1
CHMP2AO43633 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CHMP2AO43633 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.3■■□□□ 1
CHMP2AO43633 AL049812.1-201ENST00000432563 2267 ntBASIC21.3■■□□□ 1
CHMP2AO43633 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2AO43633 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.29■■□□□ 1
CHMP2AO43633 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP2AO43633 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2AO43633 FEM1AP3-201ENST00000403722 1741 ntBASIC21.29■■□□□ 1
CHMP2AO43633 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CHMP2AO43633 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.29■■□□□ 1
CHMP2AO43633 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2AO43633 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP2AO43633 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2AO43633 FP475955.4-201ENST00000623131 1990 ntBASIC21.29■■□□□ 1
CHMP2AO43633 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.29■■□□□ 1
CHMP2AO43633 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.29■■□□□ 1
CHMP2AO43633 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP2AO43633 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CHMP2AO43633 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.29■■□□□ 1
CHMP2AO43633 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms