Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.18□□□□□ -0.14
SNAI2O43623 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.18□□□□□ -0.14
SNAI2O43623 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.18□□□□□ -0.14
SNAI2O43623 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.18□□□□□ -0.14
SNAI2O43623 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.18□□□□□ -0.14
SNAI2O43623 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 AL589743.5-201ENST00000616611 1050 ntBASIC14.18□□□□□ -0.14
SNAI2O43623 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.18□□□□□ -0.14
SNAI2O43623 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.18□□□□□ -0.14
SNAI2O43623 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNAI2O43623 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNAI2O43623 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.18□□□□□ -0.14
SNAI2O43623 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 AC090164.3-201ENST00000610780 2143 ntBASIC14.17□□□□□ -0.14
SNAI2O43623 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 AC135050.7-201ENST00000624508 2218 ntBASIC14.17□□□□□ -0.14
SNAI2O43623 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.17□□□□□ -0.14
SNAI2O43623 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SNAI2O43623 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SNAI2O43623 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNAI2O43623 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNAI2O43623 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.16□□□□□ -0.14
SNAI2O43623 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SNAI2O43623 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.16□□□□□ -0.14
SNAI2O43623 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.16□□□□□ -0.14
SNAI2O43623 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNAI2O43623 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.16□□□□□ -0.14
SNAI2O43623 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.16□□□□□ -0.14
SNAI2O43623 TNRC18P3-201ENST00000441896 2691 ntBASIC14.16□□□□□ -0.14
SNAI2O43623 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.16□□□□□ -0.14
SNAI2O43623 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.16□□□□□ -0.14
SNAI2O43623 CNN2P6-201ENST00000439038 900 ntBASIC14.16□□□□□ -0.14
SNAI2O43623 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.16□□□□□ -0.14
SNAI2O43623 NTF6G-201ENST00000591094 616 ntBASIC14.16□□□□□ -0.14
SNAI2O43623 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 AC069236.1-201ENST00000604339 616 ntBASIC14.16□□□□□ -0.14
SNAI2O43623 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.16□□□□□ -0.14
SNAI2O43623 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNAI2O43623 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNAI2O43623 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms