Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RNF13O43567 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF13O43567 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF13O43567 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF13O43567 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 AC006058.3-201ENST00000606217 1069 ntBASIC17.28■□□□□ 0.36
RNF13O43567 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF13O43567 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF13O43567 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RNF13O43567 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF13O43567 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF13O43567 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF13O43567 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF13O43567 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF13O43567 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF13O43567 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF13O43567 C1QL1P1-201ENST00000568105 661 ntBASIC17.27■□□□□ 0.36
RNF13O43567 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF13O43567 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF13O43567 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF13O43567 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF13O43567 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF13O43567 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF13O43567 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RNF13O43567 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF13O43567 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF13O43567 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF13O43567 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
RNF13O43567 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF13O43567 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RNF13O43567 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF13O43567 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RNF13O43567 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF13O43567 AC073648.6-201ENST00000641589 218 ntBASIC17.26■□□□□ 0.35
RNF13O43567 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF13O43567 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF13O43567 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms