Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.99□□□□□ -0.33
NDUFA1O15239 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 AL512625.2-201ENST00000417533 625 ntBASIC12.99□□□□□ -0.33
NDUFA1O15239 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.99□□□□□ -0.33
NDUFA1O15239 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 RARRES2P6-201ENST00000567333 442 ntBASIC12.99□□□□□ -0.33
NDUFA1O15239 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NDUFA1O15239 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NDUFA1O15239 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NDUFA1O15239 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.99□□□□□ -0.33
NDUFA1O15239 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.99□□□□□ -0.33
NDUFA1O15239 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.99□□□□□ -0.33
NDUFA1O15239 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NDUFA1O15239 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NDUFA1O15239 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 ZNF815P-204ENST00000434898 1737 ntBASIC12.98□□□□□ -0.33
NDUFA1O15239 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA1O15239 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NDUFA1O15239 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
NDUFA1O15239 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.98□□□□□ -0.33
NDUFA1O15239 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA1O15239 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.97□□□□□ -0.33
NDUFA1O15239 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NDUFA1O15239 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms