Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.01■□□□□ 0.63
PFDN6O15212 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.01■□□□□ 0.63
PFDN6O15212 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PFDN6O15212 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.01■□□□□ 0.63
PFDN6O15212 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.01■□□□□ 0.63
PFDN6O15212 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.01■□□□□ 0.63
PFDN6O15212 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PFDN6O15212 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PFDN6O15212 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.01■□□□□ 0.63
PFDN6O15212 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PFDN6O15212 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 AC098818.2-201ENST00000564925 2320 ntBASIC19.01■□□□□ 0.63
PFDN6O15212 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PFDN6O15212 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.01■□□□□ 0.63
PFDN6O15212 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PFDN6O15212 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 TNXA-203ENST00000507684 2038 ntBASIC19■□□□□ 0.63
PFDN6O15212 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PFDN6O15212 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PFDN6O15212 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19■□□□□ 0.63
PFDN6O15212 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19■□□□□ 0.63
PFDN6O15212 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19■□□□□ 0.63
PFDN6O15212 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PFDN6O15212 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PFDN6O15212 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.99■□□□□ 0.63
PFDN6O15212 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PFDN6O15212 TSPY20P-201ENST00000450910 630 ntBASIC18.99■□□□□ 0.63
PFDN6O15212 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.99■□□□□ 0.63
PFDN6O15212 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.99■□□□□ 0.63
PFDN6O15212 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 KRT16P1-201ENST00000399124 1418 ntBASIC18.99■□□□□ 0.63
PFDN6O15212 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.99■□□□□ 0.63
PFDN6O15212 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PFDN6O15212 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.98■□□□□ 0.63
PFDN6O15212 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.98■□□□□ 0.63
PFDN6O15212 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.98■□□□□ 0.63
PFDN6O15212 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.98■□□□□ 0.63
PFDN6O15212 AL031985.4-201ENST00000642138 673 ntBASIC18.98■□□□□ 0.63
PFDN6O15212 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.98■□□□□ 0.63
PFDN6O15212 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PFDN6O15212 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms