Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.29■□□□□ 0.52
CDX4O14627 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDX4O14627 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.29■□□□□ 0.52
CDX4O14627 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.29■□□□□ 0.52
CDX4O14627 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.29■□□□□ 0.52
CDX4O14627 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.29■□□□□ 0.52
CDX4O14627 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.29■□□□□ 0.52
CDX4O14627 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.29■□□□□ 0.52
CDX4O14627 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.29■□□□□ 0.52
CDX4O14627 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDX4O14627 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDX4O14627 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
CDX4O14627 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.28■□□□□ 0.52
CDX4O14627 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDX4O14627 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDX4O14627 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CDX4O14627 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.28■□□□□ 0.52
CDX4O14627 AC092183.1-201ENST00000469884 875 ntBASIC18.28■□□□□ 0.52
CDX4O14627 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.28■□□□□ 0.52
CDX4O14627 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.28■□□□□ 0.52
CDX4O14627 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDX4O14627 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 KRT8P3-201ENST00000519669 1449 ntBASIC18.28■□□□□ 0.52
CDX4O14627 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDX4O14627 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDX4O14627 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDX4O14627 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDX4O14627 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.27■□□□□ 0.52
CDX4O14627 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 SDHAP1-207ENST00000440850 2000 ntBASIC18.27■□□□□ 0.52
CDX4O14627 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CDX4O14627 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.27■□□□□ 0.52
CDX4O14627 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.27■□□□□ 0.52
CDX4O14627 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.27■□□□□ 0.52
CDX4O14627 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CDX4O14627 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CDX4O14627 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.27■□□□□ 0.52
CDX4O14627 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.27■□□□□ 0.52
CDX4O14627 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDX4O14627 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDX4O14627 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDX4O14627 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.27■□□□□ 0.51
CDX4O14627 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
CDX4O14627 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDX4O14627 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CDX4O14627 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDX4O14627 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
CDX4O14627 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.26■□□□□ 0.51
CDX4O14627 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 KRT18P58-201ENST00000527480 1120 ntBASIC18.26■□□□□ 0.51
CDX4O14627 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.26■□□□□ 0.51
CDX4O14627 AL773604.1-201ENST00000617417 272 ntBASIC18.26■□□□□ 0.51
CDX4O14627 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDX4O14627 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.26■□□□□ 0.51
CDX4O14627 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
CDX4O14627 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.26■□□□□ 0.51
CDX4O14627 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.26■□□□□ 0.51
CDX4O14627 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDX4O14627 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
CDX4O14627 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms