Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 TSPY15P-201ENST00000457163 923 ntBASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.33■■□□□ 1.01
SPDYE4A6NLX3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.33■■□□□ 1
SPDYE4A6NLX3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SPDYE4A6NLX3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.33■■□□□ 1
SPDYE4A6NLX3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.33■■□□□ 1
SPDYE4A6NLX3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SPDYE4A6NLX3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SPDYE4A6NLX3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
SPDYE4A6NLX3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SPDYE4A6NLX3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.33■■□□□ 1
SPDYE4A6NLX3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 AC026471.5-201ENST00000615068 467 ntBASIC21.32■■□□□ 1
SPDYE4A6NLX3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.32■■□□□ 1
SPDYE4A6NLX3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SPDYE4A6NLX3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPDYE4A6NLX3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
SPDYE4A6NLX3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms