Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 UBE2DNL-204ENST00000602536 740 ntBASIC13.4□□□□□ -0.26
LINC01546A6NGU7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01546A6NGU7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LINC01546A6NGU7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 TSPY21P-201ENST00000433481 731 ntBASIC13.39□□□□□ -0.27
LINC01546A6NGU7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 CYP2T3P-201ENST00000601990 817 ntBASIC13.39□□□□□ -0.27
LINC01546A6NGU7 AC010536.3-201ENST00000620306 533 ntBASIC13.39□□□□□ -0.27
LINC01546A6NGU7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 AL121761.2-201ENST00000598007 1648 ntBASIC13.39□□□□□ -0.27
LINC01546A6NGU7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01546A6NGU7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.38□□□□□ -0.27
LINC01546A6NGU7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.38□□□□□ -0.27
LINC01546A6NGU7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 PBX2P1-201ENST00000493219 1291 ntBASIC13.38□□□□□ -0.27
LINC01546A6NGU7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 MTMR9LP-203ENST00000426597 1545 ntBASIC13.38□□□□□ -0.27
LINC01546A6NGU7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 AC004854.2-201ENST00000608450 1441 ntBASIC13.38□□□□□ -0.27
LINC01546A6NGU7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC01546A6NGU7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms