Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.89■□□□□ 0.62
TBC1D3FA6NER0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 TREX1-205ENST00000625293 1783 ntBASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 FAM86EP-206ENST00000510506 987 ntBASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 GPAT2P1-201ENST00000444924 1672 ntBASIC18.89■□□□□ 0.61
TBC1D3FA6NER0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 AC112907.2-201ENST00000448639 330 ntBASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.88■□□□□ 0.61
TBC1D3FA6NER0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.87■□□□□ 0.61
TBC1D3FA6NER0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 IER3-202ENST00000376377 1350 ntBASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 STARP1-201ENST00000397973 869 ntBASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms