Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 CNN2P6-201ENST00000439038 900 ntBASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 AL589743.5-201ENST00000616611 1050 ntBASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MEIS3P1A6NDR6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 ABALON-201ENST00000629058 1903 ntBASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MEIS3P1A6NDR6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 KRT17P1-201ENST00000399211 1546 ntBASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 CYP2T1P-201ENST00000432607 1285 ntBASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 NTF6G-201ENST00000591094 616 ntBASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MEIS3P1A6NDR6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms