Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 MESTP1-201ENST00000404287 994 ntBASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AC012618.2-201ENST00000428058 849 ntBASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 B3GAT3P1-201ENST00000471720 806 ntBASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 MIR6786-201ENST00000616843 113 ntBASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 AC113410.3-201ENST00000623366 203 ntBASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC162PA2VCL2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 AL049637.2-201ENST00000641778 930 ntBASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC162PA2VCL2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 PRSS44-201ENST00000515154 1146 ntBASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC162PA2VCL2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 FAM207BP-201ENST00000447172 505 ntBASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 FSCN1P1-201ENST00000568912 1481 ntBASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms