Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC66A2RUB6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 AC073210.2-201ENST00000430369 194 ntBASIC20.49■□□□□ 0.87
CCDC66A2RUB6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 AC080038.1-201ENST00000611274 1154 ntBASIC20.49■□□□□ 0.87
CCDC66A2RUB6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 TFP1-202ENST00000475455 1573 ntBASIC20.49■□□□□ 0.87
CCDC66A2RUB6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC66A2RUB6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 AF201337.1-201ENST00000520239 748 ntBASIC20.48■□□□□ 0.87
CCDC66A2RUB6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 AC073111.5-205ENST00000641717 521 ntBASIC20.48■□□□□ 0.87
CCDC66A2RUB6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC66A2RUB6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 AL390719.1-204ENST00000412397 1219 ntBASIC20.47■□□□□ 0.87
CCDC66A2RUB6 BX276092.2-201ENST00000417668 665 ntBASIC20.47■□□□□ 0.87
CCDC66A2RUB6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 AC105036.2-201ENST00000569468 176 ntBASIC20.47■□□□□ 0.87
CCDC66A2RUB6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC66A2RUB6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms