Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SSC5DA1L4H1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SSC5DA1L4H1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.13■■□□□ 1.13
SSC5DA1L4H1 AC092667.1-201ENST00000434301 2586 ntBASIC22.13■■□□□ 1.13
SSC5DA1L4H1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 AC233702.3-201ENST00000578656 1387 ntBASIC22.12■■□□□ 1.13
SSC5DA1L4H1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 AC104819.1-201ENST00000504587 486 ntBASIC22.12■■□□□ 1.13
SSC5DA1L4H1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SSC5DA1L4H1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 RCC2P3-201ENST00000418112 1537 ntBASIC22.11■■□□□ 1.13
SSC5DA1L4H1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 AC104390.1-201ENST00000555663 520 ntBASIC22.11■■□□□ 1.13
SSC5DA1L4H1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 AL121912.1-201ENST00000603683 238 ntBASIC22.11■■□□□ 1.13
SSC5DA1L4H1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 HOXB1-202ENST00000577092 1414 ntBASIC22.11■■□□□ 1.13
SSC5DA1L4H1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SSC5DA1L4H1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 KRT18P23-201ENST00000435622 1283 ntBASIC22.1■■□□□ 1.13
SSC5DA1L4H1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 HLA-A-201ENST00000376802 1334 ntBASIC22.1■■□□□ 1.13
SSC5DA1L4H1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 AL109659.2-201ENST00000606809 1674 ntBASIC22.1■■□□□ 1.13
SSC5DA1L4H1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 AC008556.1-201ENST00000610908 2040 ntBASIC22.1■■□□□ 1.13
SSC5DA1L4H1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
SSC5DA1L4H1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 AL353801.3-201ENST00000609898 542 ntBASIC22.09■■□□□ 1.13
SSC5DA1L4H1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 TP73-AS1-207ENST00000624167 988 ntBASIC22.09■■□□□ 1.13
SSC5DA1L4H1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.09■■□□□ 1.13
SSC5DA1L4H1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms